CF matrix is conflict-free matrix, tree data is a data table contains `from`, `to` and `label` columns at least.
cf2treedata(CFmatrix_file)a file path to CFMatrix file.
a dataframe
CFmatrix_file = system.file("extdata", "ground_truth_tree.CFMatrix", package = "converTree")
cf2treedata(CFmatrix_file)
#> Tree data bone seems ok
#> parent node label
#> 1 23 23 <NA>
#> 2 23 24 M16|M17
#> 3 23 45 M29|M30|M31|M32|M33|M34|M35|M36|M37|M38|M39|M40|M41
#> 4 23 46 M4|M5
#> 5 23 27 M1|M2|M3
#> 6 26 1 sc1
#> 7 29 3 sc10_1
#> 8 30 5 sc11
#> 9 33 6 sc12
#> 10 34 7 sc13
#> 11 36 8 sc14
#> 12 37 9 sc15
#> 13 40 10 sc16_1
#> 14 39 12 sc17
#> 15 41 13 sc18
#> 16 42 14 sc19
#> 17 43 16 sc3
#> 18 44 17 sc4
#> 19 45 18 sc5
#> 20 48 19 sc6
#> 21 49 20 sc7
#> 22 50 21 sc8
#> 23 51 22 sc9
#> 24 24 25 M18
#> 25 25 26 M19|M20|M21|M22|M23
#> 26 27 28 M73
#> 27 28 29 M74|M75|M76|M77|M78|M79
#> 28 28 30 M80|M81|M82
#> 29 27 31 M42
#> 30 31 32 M43|M44|M45
#> 31 32 33 M46
#> 32 32 34 M47|M48|M49
#> 33 31 35 M50|M51
#> 34 35 36 M52
#> 35 35 37 M53
#> 36 35 38 M54|M55|M56
#> 37 38 39 M57
#> 38 39 40 M58|M59|M60|M61|M62|M63
#> 39 38 41 M64|M65|M66|M67|M68
#> 40 41 42 M69|M70|M71|M72
#> 41 25 43 M24|M25|M26
#> 42 24 44 M27|M28
#> 43 46 47 M6
#> 44 47 48 M7|M8
#> 45 48 49 M9
#> 46 47 50 M10|M11|M12|M13|M14
#> 47 46 51 M15
#> 48 26 2 sc2
#> 49 29 4 sc10_2
#> 50 40 11 sc16_2
#> 51 42 15 sc20